CCDC57

Protein-coding gene in humans
CCDC57
Identifiers
AliasesCCDC57, coiled-coil domain containing 57
External IDsMGI: 1918526; HomoloGene: 52351; GeneCards: CCDC57; OMA:CCDC57 - orthologs
Gene location (Human)
Chromosome 17 (human)
Chr.Chromosome 17 (human)[1]
Chromosome 17 (human)
Genomic location for CCDC57
Genomic location for CCDC57
Band17q25.3Start82,101,460 bp[1]
End82,212,830 bp[1]
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)[2]
Chromosome 11 (mouse)
Genomic location for CCDC57
Genomic location for CCDC57
Band11|11 E2Start120,717,355 bp[2]
End120,823,698 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right uterine tube

  • anterior pituitary

  • olfactory zone of nasal mucosa

  • right lobe of thyroid gland

  • right hemisphere of cerebellum

  • sural nerve

  • left lobe of thyroid gland

  • left testis

  • right testis

  • granulocyte
Top expressed in
  • seminiferous tubule

  • morula

  • muscle of thigh

  • neural layer of retina

  • granulocyte

  • ventricular zone

  • superior frontal gyrus

  • adrenal gland

  • tail of embryo

  • primary visual cortex
More reference expression data
BioGPS
n/a
Orthologs
SpeciesHumanMouse
Entrez

284001

71276

Ensembl

ENSG00000176155

ENSMUSG00000048445

UniProt

Q2TAC2

Q6PHN1

RefSeq (mRNA)
NM_152675
NM_198082
NM_001316321
NM_001367828
NM_001394669

NM_001394670

NM_027745

RefSeq (protein)

NP_001303250
NP_932348
NP_001354757

NP_082021

Location (UCSC)Chr 17: 82.1 – 82.21 MbChr 11: 120.72 – 120.82 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Coiled-coil domain-containing protein 57 is a protein that in humans is encoded by the CCDC57 gene.[5]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000176155 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000048445 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: coiled-coil domain containing 57". Retrieved 2011-08-30.

External links

Further reading

  • Talmud PJ, Drenos F, Shah S, et al. (2009). "Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip". Am. J. Hum. Genet. 85 (5): 628–42. doi:10.1016/j.ajhg.2009.10.014. PMC 2775832. PMID 19913121.
  • Rose JE, Behm FM, Drgon T, et al. (2010). "Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score". Mol. Med. 16 (7–8): 247–53. doi:10.2119/molmed.2009.00159. PMC 2896464. PMID 20379614.
  • Ozyildirim AM, Wistow GJ, Gao J, et al. (2005). "The lacrimal gland transcriptome is an unusually rich source of rare and poorly characterized gene transcripts". Invest. Ophthalmol. Vis. Sci. 46 (5): 1572–80. CiteSeerX 10.1.1.123.3574. doi:10.1167/iovs.04-1380. PMID 15851553.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Yu W, Andersson B, Worley KC, et al. (1997). "Large-scale concatenation cDNA sequencing". Genome Res. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
  • Andersson B, Wentland MA, Ricafrente JY, et al. (1996). "A "double adaptor" method for improved shotgun library construction". Anal. Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Dias Neto E, Correa RG, Verjovski-Almeida S, et al. (2000). "Shotgun sequencing of the human transcriptome with ORF expressed sequence tags". Proc. Natl. Acad. Sci. U.S.A. 97 (7): 3491–6. Bibcode:2000PNAS...97.3491D. doi:10.1073/pnas.97.7.3491. PMC 16267. PMID 10737800.
  • Bailey SD, Xie C, Do R, et al. (2010). "Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study". Diabetes Care. 33 (10): 2250–3. doi:10.2337/dc10-0452. PMC 2945168. PMID 20628086.


  • v
  • t
  • e